tests/testthat/_snaps/Isorank.md

In dpmcsuss/iGraphMatch: Tools for Graph Matching

isorank match with greedy LAP

gm(A = A, B = B, seeds = seeds, similarity = startm, method = "IsoRank", 
    lap_method = "greedy")

Match (10 x 10):
   corr_A corr_B
1       1      1
2       2      2
3       3      3
4       4      4
5       5      9
6       6      6
7       7     10
8       8      8
9       9      5
10     10      7

      [,1] [,2] [,3] [,4]   [,5]   [,6]   [,7]   [,8]   [,9]  [,10]
 [1,]    1    0    0    0 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000
 [2,]    0    1    0    0 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000
 [3,]    0    0    1    0 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000
 [4,]    0    0    0    1 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000
 [5,]    0    0    0    0 0.0187 0.0035 0.0120 0.0068 0.0120 0.0042
 [6,]    0    0    0    0 0.0013 0.0007 0.0009 0.0005 0.0009 0.0009
 [7,]    0    0    0    0 0.0061 0.0012 0.0050 0.0010 0.0050 0.0053
 [8,]    0    0    0    0 0.0099 0.0032 0.0036 0.0065 0.0036 0.0037
 [9,]    0    0    0    0 0.0196 0.0042 0.0126 0.0074 0.0126 0.0050
[10,]    0    0    0    0 0.0057 0.0010 0.0046 0.0009 0.0046 0.0051

isorank match with hungarian lap

gm(A = A, B = B, seeds = seeds, similarity = startm, method = "IsoRank", 
    lap_method = "LAP")

Match (10 x 10):
   corr_A corr_B
1       1      1
2       2      2
3       3      3
4       4      4
5       5      9
6       6      6
7       7      7
8       8      8
9       9      5
10     10     10

      [,1] [,2] [,3] [,4]   [,5]   [,6]   [,7]   [,8]   [,9]  [,10]
 [1,]    1    0    0    0 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000
 [2,]    0    1    0    0 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000
 [3,]    0    0    1    0 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000
 [4,]    0    0    0    1 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000
 [5,]    0    0    0    0 0.0187 0.0035 0.0120 0.0068 0.0120 0.0042
 [6,]    0    0    0    0 0.0013 0.0007 0.0009 0.0005 0.0009 0.0009
 [7,]    0    0    0    0 0.0061 0.0012 0.0050 0.0010 0.0050 0.0053
 [8,]    0    0    0    0 0.0099 0.0032 0.0036 0.0065 0.0036 0.0037
 [9,]    0    0    0    0 0.0196 0.0042 0.0126 0.0074 0.0126 0.0050
[10,]    0    0    0    0 0.0057 0.0010 0.0046 0.0009 0.0046 0.0051

IsoRank multi-layer

gm(A = A, B = B, seeds = seeds, similarity = startm, method = "IsoRank", 
    lap_method = "LAP")

Match (10 x 10):
   corr_A corr_B
1       1      1
2       2      2
3       3      3
4       4      4
5       5      5
6       6      6
7       7      7
8       8      8
9       9      9
10     10     10

      [,1] [,2] [,3]   [,4]   [,5]   [,6]   [,7]   [,8]   [,9]  [,10]
 [1,]    1    0    0 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000
 [2,]    0    1    0 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000
 [3,]    0    0    1 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000
 [4,]    0    0    0 0.2610 0.0108 0.0111 0.0113 0.0063 0.0143 0.0103
 [5,]    0    0    0 0.0070 0.0227 0.0078 0.0088 0.0072 0.0229 0.0074
 [6,]    0    0    0 0.0061 0.0101 0.0138 0.0163 0.0079 0.0118 0.0070
 [7,]    0    0    0 0.0083 0.0117 0.0163 0.0249 0.0114 0.0183 0.0095
 [8,]    0    0    0 0.0061 0.0108 0.0071 0.0122 0.0113 0.0108 0.0064
 [9,]    0    0    0 0.0061 0.0217 0.0138 0.0132 0.0033 0.0571 0.0083
[10,]    0    0    0 0.0081 0.0158 0.0086 0.0095 0.0025 0.0205 0.0092

dpmcsuss/iGraphMatch documentation built on May 22, 2024, 8:52 p.m.