Files in dpritchLibre/Bioactivity
PepSAVI-MS Data Analysis
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
NEWS.md
R/BinMS-Helper.R
R/BinMS.R
R/Extract_Var.R
R/FilterMS-Helper.R
R/FilterMS.R
R/MsDat-API.R
R/MsDat-Helper.R
R/MsDat.R
R/RankEN-Helper.R
R/RankEN.R
R/Utility-Formatting.R
R/data.R
README.md
cran-comments.md
data-raw/20150427_CLK_BAP_VO_peptide_ion_data.csv
data-raw/20160727_VO all active bioactivity data with replicates.csv
data-raw/Subset-Progenesis.R
data/bioact.rda
data/mass_spec.rda
man/binMS.Rd
man/bioact.Rd
man/extractMS.Rd
man/extract_ranked.Rd
man/filterMS.Rd
man/mass_spec.Rd
man/msDat.Rd
man/print.filterMS.Rd
man/print.msDat.Rd
man/print.rankEN.Rd
man/rankEN.Rd
man/summary.binMS.Rd
man/summary.filterMS.Rd
man/summary.rankEN.Rd
tests/construct-data/cd-binMS.R
tests/construct-data/cd-extract.R
tests/construct-data/cd-filterMS.R
tests/construct-data/cd-msDat.R
tests/construct-data/cd-rankEN-sim.R
tests/construct-data/cd-rankEN-test.R
tests/construct-data/cd-summary-binMS.R
tests/construct-data/cd-summary-filterMS.R
tests/construct-data/cd-summary-rankEN.R
tests/data/data-binMS.RData
tests/data/data-extract.RData
tests/data/data-filterMS.RData
tests/data/data-msDat.RData
tests/data/data-rankEN-sim.RData
tests/data/data-summary-binMS.RData
tests/data/data-summary-filterMS.RData
tests/data/data-summary-rankEN.RData
tests/testthat.R
tests/testthat/test-binMS.R
tests/testthat/test-extract.R
tests/testthat/test-filterMS.R
tests/testthat/test-msDat.R
tests/testthat/test-rankEN.R
tests/testthat/test-summary-binMS.R
tests/testthat/test-summary-filterMS.R
tests/testthat/test-summary-rankEN.R
vignettes/Paper_Analysis.Rnw
vignettes/PepSAVIms_Introduction.Rnw
vignettes/Shared_Preamble.tex
vignettes/images/Analysis_Regions.pdf
vignettes/images/Binning_Flowchart.pdf
vignettes/images/Binning_Input.pdf
vignettes/images/Region_Of_Interest.pdf
