meanVarPlot-methods: Methods for Function 'meanVarPlot' in Package 'EDASeq'
In drisso/EDASeq: Exploratory Data Analysis and Normalization for RNA-Seq
Description
meanVarPlot produces a smoothScatter plot of the mean variance relation.
Methods
signature(x = "SeqExpressionSet")-
It takes as additional argument log, which if true consider the logarithm of the counts before computing mean and variance. To avoid missing values, we consider the maximum between 0 and the log of the counts. Along with the scatter plot the function plots a line representing the lowess fit.
drisso/EDASeq documentation built on June 22, 2021, 4:18 a.m.
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Description
meanVarPlot produces a smoothScatter plot of the mean variance relation.
Methods
signature(x = "SeqExpressionSet")-
It takes as additional argument
log, which if true consider the logarithm of the counts before computing mean and variance. To avoid missing values, we consider the maximum between 0 and the log of the counts. Along with the scatter plot the function plots a line representing thelowessfit.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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