defunct: Defunct methods

defunctR Documentation

Defunct methods

Description

Defunct methods in the SingleCellExperiment package.

Named size factors

The class now only supports one set of size factors, accessible via sizeFactors. This represents a simplification of the class and removes a difficult part of the API (that had to deal with both NULL and strings to specify the size factor set of interest).

Spike-ins

It is recommended to handle spike-ins and other “alternative” features via altExps.

Author(s)

Aaron Lun


drisso/SingleCellExperiment documentation built on Nov. 12, 2024, 7:01 a.m.