MACS (model based analysis for ChIP-Seq) is a popular program for converting ChIP-Seq reads into peaks. If produces a number of output files in a directory, which to my mind can be improved a little. This package imports these results, can improve the result files, and can annotate peaks with their nearest TSS and CpG island.
Package details |
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Author | Mark Cowley |
Maintainer | Mark Cowley <m.cowley@garvan.org.au> |
License | GPL-2 |
Version | 1.2.0 |
Package repository | View on GitHub |
Installation |
Install the latest version of this package by entering the following in R:
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