annotatePeakInBatch.example2: annotatePeakInBatch.example2
In drmjc/macsR: Facilitate analysis of MACS results.
Description
you have a list of transcription factor biding sites from
literature and are interested in determining the extent
of the overlap to the list of peaks from your experiment.
Prior calling the function annotatePeakInBatch, need to
represent both dataset as RangedData where start is the
start of the binding site, end is the end of the binding
site, names is the name of the binding site, space and
strand are the chromosome name and strand where the
binding site is located.
Usage
1
Author(s)
Julie Zhu
drmjc/macsR documentation built on May 15, 2019, 2:23 p.m.
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Description
you have a list of transcription factor biding sites from literature and are interested in determining the extent of the overlap to the list of peaks from your experiment. Prior calling the function annotatePeakInBatch, need to represent both dataset as RangedData where start is the start of the binding site, end is the end of the binding site, names is the name of the binding site, space and strand are the chromosome name and strand where the binding site is located.
Usage
1 |
Author(s)
Julie Zhu
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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