import_genie3: Output Parser for GENIE3
In drostlab/edgynode: Comparison of Gene Regulatory Networks
View source: R/import_genie3.R
import_genie3 R Documentation
Output Parser for GENIE3
Description
This function parses the standard output generated by the BEELINE tool GENIE3.
Usage
import_genie3(filename)
Arguments
filename
a file path to the GENIE3 output file generated by BEELINE.
Author(s)
Ilias Moutsopoulos
Examples
# path to GENIE3 output file
genie3_output <- system.file('beeline_examples/GENIE3/outFile.csv', package = 'edgynode')
# import GENIE3 specific output
genie3_parsed <- import_genie3(genie3_output)
# look at output
head(genie3_parsed)
drostlab/edgynode documentation built on March 29, 2024, 10:36 a.m.
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View source: R/import_genie3.R
| import_genie3 | R Documentation |
Output Parser for GENIE3
Description
This function parses the standard output generated by the BEELINE tool GENIE3.
Usage
import_genie3(filename)
Arguments
filename |
a file path to the GENIE3 output file generated by BEELINE. |
Author(s)
Ilias Moutsopoulos
Examples
# path to GENIE3 output file
genie3_output <- system.file('beeline_examples/GENIE3/outFile.csv', package = 'edgynode')
# import GENIE3 specific output
genie3_parsed <- import_genie3(genie3_output)
# look at output
head(genie3_parsed)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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