| bereFull | Bipartite Edge Reconstruction from Expression data (composite... |
| calculate.tm.p.values | Calculate p-values for a tranformation matrix |
| checkDataType | Checks that data is something MONSTER can handle |
| degreeApproach | function for building a network based only on node degree |
| dTFIPlot | This function plots the Off diagonal mass of an observed... |
| hcl.heatmap.plot | Transformation matrix plot |
| ldaBERE | Bipartite Edge Reconstruction from Expression data (LDA... |
| monster | MOdeling Network State Transitions from Expression and... |
| monsterNI | Bipartite Edge Reconstruction from Expression data |
| MONSTER-package | Modeling Network State Transitions from Expression and... |
| plot.monster | plot.monster |
| print.monster | print.panda |
| ssodm | Sum of squared off-diagonal mass |
| transformation.matrix | Bi-partite network analysis tools |
| transitionNetworkPlot | This function uses igraph to plot the transition matrix as a... |
| transitionPCAPlot | Principal Components plot of transformation matrix |
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