hcl.heatmap.plot: Transformation matrix plot

In dschlauch/bptools: Bi-partite network analysis tools

Description

This function plots a hierachically clustered heatmap and corresponding dendrogram of a transaction matrix

Usage

hcl.heatmap.plot(x, method = "pearson")

Arguments

method	distance metric for hierarchical clustering. Default is "Pearson correlation"
net1	starting network, a genes by transcription factors data.frame with scores for confidence in the existence of edges between

Examples

data(yeast.panda)
t.matrix <- transformation.matrix(yeast.panda$cell.cycle, yeast.panda$stress.response)
hcl.heatmap.plot(t.matrix, method="pearson")

dschlauch/bptools documentation built on May 15, 2019, 2:58 p.m.