Man pages for dswatson/bioplotr
Pretty plots for bioinformatics analysis pipelines

colorizeAssign Colors
dist_matCreate Distance Matrix
embedEmbed Manifold
format_binomFormat Binomial Things
format_featuresFormat Features
gg_outOutput Image
is.colorTest for Valid Color Representation
matrixizeStandardize Matrix
plot_boxBox Plots by Sample
plot_calibrationProbability Calibration Curve(s)
plot_concordanceConcordance Plot
plot_consensusConsensus Matrix Heatmap
plot_corrCorrelation Plot
plot_densityDensity Plots by Sample
plot_dispersionPlot Dispersion Estimates
plot_driversPlot Drivers of Omic Variation
plot_heatmapOmic Heatmap
plot_lleLLE Plot
plot_lorenzLorenz Curve(s)
plot_mdMean-Difference Plot
plot_mdsMDS Plot
plot_mvMean-Variance Plot
plot_pcaPCA Plot
plot_prPrecision-Recall Curve(s)
plot_qqQ-Q Plot
plot_quantilesPlot Quantiles
plot_rocReicever Operating Characteristic Curve(s)
plot_sammonSammon Map
plot_similaritySimilarity Matrix Heatmap
plot_somSOM
plot_survivalSurvival Curve(s)
plot_tacoTaco Plot
plot_treeTree Plots
plot_tsnet-SNE Plot
plot_volcanoVolcano Plot
plot_voomVoom Plot
pt_alphaSet Data Point Transparency
pt_sizeSize Data Points
stringifyFormat String
track_colsFormat Annotation Track Colors
var_filtFilter by Variance
dswatson/bioplotr documentation built on Aug. 28, 2017, 6:49 p.m.