Man pages for dyerlab/popgraph
This is an R package that constructs and manipulates population graphs

altSonoran desert altitude.
arapat_mvAraptus attenuatus data
arapat_popArapat popualtion data
as.popgraphConverts an object of type matrix or igraph into 'popgraph'
bajaMetadata for Baja Populations.
centroid_distanceThis function takes a data set and a group set and returns...
centroid_varianceThis function takes a data set and a group set and returns...
congruence_topologyReturns congruence topology
decorate_graphMerge data into popgraph node-wise
edge_contortionDetermines of edges are stretched or compressed and adds...
for_leafletThis function convers the popgraph object into an object that...
geom_edgelabelsPlotting of a population graph edge labels using ggplot...
geom_edgesetPlotting of a population graph edge set using ggplot neumonic
geom_nodesetPlotting of a population graph edge set using ggplot neumonic
lophoLophocereus population graph
overlay_popgraphConvience function to plot edges from 'popgraph'
permute_popgraphBootstraps individuals to see stability of graph topology.
popgraphDefault constructor for a 'PopulationGraph' object
popgraph-operator-minusOverload '-' operator for pairs of 'popgraph' objects
popgraph-packagePackage for the creation of population graph objects
randomize_graphRandomize Graph
read_popgraphReads in a population graph text file
test_congruenceReturns distance congruence between the two graphs
to_data.frameConverts 'popgraph' to 'data.frame' based upon node...
to_dfConverts popgraph into Data.Frame
to_geojsonConverts popgraph to geojson for import into ArcGIS Online
to_htmlConverts population graph to html file for interactive...
to_jsonConverts to json representation
to_kmlConverts population graph to KML file
to_matrixMatrix conversion for Population Graph
to_pgraphConverts graph to a pgraph file format
to_sfThis function convers the popgraph object into an object that...
to_SpatialLinesConverts edge set to SpatialLines object
to_SpatialPointsTranslate object into a SpatialPoints object
upigaUpiga population graph
write_popgraphConvience function for file exports
dyerlab/popgraph documentation built on July 22, 2022, 5:42 p.m.