to_h5ad: Copy trajectory to h5ad

In dynverse/dynio:

Description

Copy trajectory to h5ad

Usage

to_h5ad(
  traj,
  anndata = NULL,
  trajectory_prefix = NULL,
  dimred_name = NULL,
  grouping_name = NULL,
  fimp_name = NULL
)

Arguments

traj	Trajectory object
anndata	AnnData object
trajectory_prefix	The prefix of a trajectory to write.
dimred_name	A dimred to write, a matrix in 'ad$obsm'.
grouping_name	A grouping to write, a column in 'ad$obs'.
fimp_name	A feature importance to write, a column in 'ad$var'.

dynverse/dynio documentation built on Dec. 20, 2021, 2:19 a.m.