dynplot: Create a dynplot with a specified layout

In dynverse/dynplot2: Grammar of graphics for single-cell data

Description

Create a dynplot with a specified layout

Plot all the trajectories

Usage

dynplot(dataset, layout = layout_dimred(dataset))

Arguments

dataset	A dynwrap dataset object, typically containing a trajectory
layout	A layout_* function from dynplot, such as layout_dimred() or layout_graph()

Value

A ggplot2 object, with the processed data in plot$data and attr(plot$data, "data")

Examples

toy <- dyntoy::generate_dataset()
dynplot(dataset) +
  geom_cell_point(aes(colour = select_expression("G1"))) +
  scale_expression_fillcolour() +
  new_scale_fillcolour() +
  geom_trajectory_segments(aes(colour = edge_id))

dynverse/dynplot2 documentation built on July 2, 2019, 12:18 a.m.