procset: Convert processed MAGE-TAB files into a Bioconductor object

In ebi-gene-expression-group/bioconductor-ArrayExpress: Access the ArrayExpress Collection at EMBL-EBI Biostudies and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet

Convert processed MAGE-TAB files into a Bioconductor object

Description

procset converts local MAGE-TAB files into an ExpressionSet.

Usage

procset(files, procol)

Arguments

files	is the list with the names of the processed, the sdrf, the adf and the idf files and the path of the data as given by getAE.
procol	the name of the column to be extracted from the file. Obtained using getcolproc.

Author(s)

Ibrahim Emam, Audrey Kauffmann

Maintainer: Jose Marugan <[e-mail]>

See Also

queryAE, getAE, getcolproc

Examples

# An example can be found in the help of the getAE function.

ebi-gene-expression-group/bioconductor-ArrayExpress documentation built on April 9, 2023, 6:39 a.m.