Man pages for ebi-gene-expression-group/bioconductor-ExpressionAtlas
Search, download and visualise datasets from EMBL-EBI Expression Atlas and Single-Cell Expression Atlas
| allExps | A SimpleList containing some dummy Expression Atlas datasets |
| atlasRes | A DataFrame listing some Expression Atlas experiments |
| dotPlotSCAtlasExperiment | Dot-plot for a Single-Cell Expression Atlas experiment |
| getAnalysticsDifferentialAtlasExpression | Download differential expression analytics data for an... |
| getAtlasData | Download data from multiple Expression Atlas experiments |
| getAtlasExperiment | Download data for an Expression Atlas experiment |
| getAtlasSCExperiment | Download data for a Single-Cell Expression Atlas experiment |
| getNormalisedAtlasExpression | Download normalised expression data for an Expression Atlas... |
| heatmapAtlasExperiment | Generate HeatMap from normalised expression data for an... |
| heatmapSCAtlasExperiment | Visualise heatmap for Single-Cell Expression Atlas experiment |
| plotDimRedSCAtlasExperiment | Plot Dimensionality reductions of a Single-Cell Expression... |
| rnaseqExps | A SimpleList containing a dummy RNA-seq Expression Atlas... |
| searchAtlasExperiments | Search for Expression Atlas experiments |
| searchSCAtlasExperiments | Search for Sinle-Cell Expression Atlas experiments |
| volcanoDifferentialAtlasExperiment | Generate Volcano plots from analytics data for an Expression... |
