"Online documentation for BioCro" {target="_blank"}
Before we discuss generating documentation, we reiterate that you rarely need to. That is because the documentation is automatically generated for you and made available online!
The public documentation page at https://biocro.github.io provides up-to-date documentation for the latest release of BioCro. (This documentation will provide links to documentation of older releases.)
For the most part, developers should only need to generate documentation when they wish to check how changes made to it will be rendered, and whether that rendering is more or less correct. Changes a developer might make to the documentation include:
Changes to Doxygen-style comments in the C++ source code files
Changes to R function and data documentation (the files in the man
directory)
Changes to any of the Markdown (.md) or R Markdown (.Rmd) files
included in the Bookdown book (this book). (A list of all files
used in forming the Bookdown book is in the configuration file
bookdown/_bookdown.yml
.)
Changes to the vignettes
In most other cases, developers can simply consult the automatically-generated online version of the documentation.
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