PlotHeatmap: Plot the results of MakeHeatmapData.
In eclarke/sarcoid-microbiome-paper: Figures for the Clarke et al sarcoid microbiome paper
Description
Plot the results of MakeHeatmapData.
Usage
1
2
PlotHeatmap(heatmap.data, use.reads = TRUE, threshold = 0.6,
x.text = TRUE, x.axis = "SampleID")
Arguments
heatmap.data
the dataframe from MakeHeatmapData
use.reads
if TRUE, plot the raw readcounts; if FALSE, use proportions
threshold
at what relative proportion the color scale goes to red
x.text
display labels on the x-axis
eclarke/sarcoid-microbiome-paper documentation built on May 29, 2019, 2:52 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description
Plot the results of MakeHeatmapData.
Usage
1 2 | PlotHeatmap(heatmap.data, use.reads = TRUE, threshold = 0.6,
x.text = TRUE, x.axis = "SampleID")
|
Arguments
heatmap.data |
the dataframe from MakeHeatmapData |
use.reads |
if TRUE, plot the raw readcounts; if FALSE, use proportions |
threshold |
at what relative proportion the color scale goes to red |
x.text |
display labels on the x-axis |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.