counts_matrix: Creates a counts matrix from an agglomerated data frame....
In eclarke/sarcoid-microbiome-paper: Figures for the Clarke et al sarcoid microbiome paper
Description
Usage
Arguments
Value
Description
Creates a counts matrix from an agglomerated data frame.
Optionally, metadata columns can be included (useful for some functions), in
which case the output is a data.frame, not a matrix.
Usage
1
counts_matrix(agg, additional.columns)
Arguments
agg
agglomerated data frame
additional.columns
any columns to include as columns in the matrix
Value
default: a numeric matrix with otu as rows and samples as columns.
If additional columns specified, a data.frame with otus as columns and samples as rows
eclarke/sarcoid-microbiome-paper documentation built on May 29, 2019, 2:52 p.m.
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Description Usage Arguments Value
Description
Creates a counts matrix from an agglomerated data frame. Optionally, metadata columns can be included (useful for some functions), in which case the output is a data.frame, not a matrix.
Usage
1 | counts_matrix(agg, additional.columns)
|
Arguments
agg |
agglomerated data frame |
additional.columns |
any columns to include as columns in the matrix |
Value
default: a numeric matrix with otu as rows and samples as columns. If additional columns specified, a data.frame with otus as columns and samples as rows
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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