Description Usage Arguments Value
Creates a counts matrix from an agglomerated data frame. Optionally, metadata columns can be included (useful for some functions), in which case the output is a data.frame, not a matrix.
1 | counts_matrix(agg, additional.columns)
|
agg |
agglomerated data frame |
additional.columns |
any columns to include as columns in the matrix |
default: a numeric matrix with otu as rows and samples as columns. If additional columns specified, a data.frame with otus as columns and samples as rows
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