In ed-lau/calcDNSAF: dNSAF calculator

knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>",
  fig.path = "man/figures/README-",
  out.width = "100%"
)

calcDNSAF

Calculates dNSAF.

Installation

You can install the released version of calcDNSAF with:

devtools::install_github("ed-lau/calcDNSAF")

Example

Example usage using the example data from the package:

library(calcDNSAF)
out <- calcDNSAF::dnsaf(percolatorFile = percolatorFile, fasta = Mm_UniProt, test_run=T, q_cutoff=0.01)

library(knitr)
library(kableExtra)
options("scipen"=-100, "digits"=2)

out %>% dplyr::select(-Names) %>% knitr::kable() %>% kable_styling(bootstrap_options = c("striped", "hover", "condensed", "responsive"))

ed-lau/calcDNSAF documentation built on Nov. 4, 2019, 11:29 a.m.