edvanburen/twosigma: DE Analysis for Single-Cell RNA-Sequencing Data

Implements the TWO-Component Single Cell Model-Based Association Method (TWO-SIGMA) for gene-level differential expression (DE) analysis and DE-based gene set testing of single-cell RNA-sequencing datasets. See Van Buren et al. (2020) <doi:10.1002/gepi.22361> and Van Buren et al. (2021) <doi:10.1101/2021.01.24.427979>.

Getting started

Package details

MaintainerEric Van Buren <edvanburen@gmail.com>
LicenseAGPL-3
Version1.0.2
URL https://github.com/edvanburen/twosigma
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("edvanburen/twosigma")
edvanburen/twosigma documentation built on July 3, 2023, 3:39 p.m.