dplot3_linad: Plot a Linear Additive Tree trained by s_LINAD using...
In egenn/rtemis: Machine Learning and Visualization

dplot3_linad

R Documentation

Plot a Linear Additive Tree trained by s_LINAD using visNetwork

Description

Plot a Linear Additive Tree trained by s_LINAD using visNetwork

Usage

dplot3_linad(
  x,
  main = NULL,
  bg = "#FFFFFF",
  shape = "box",
  nodelabels = TRUE,
  ncases.inlabels = TRUE,
  rules.on.edges = FALSE,
  top = NULL,
  root.col = "#202020",
  node.col = "#5a5a5a",
  leaf.col = "#178CCB",
  edge.col = "#848484",
  edge.width = 4,
  arrow.scale = 0.7,
  arrow.middle = FALSE,
  col.highlight = "#FE4AA3",
  node.font.col = NULL,
  edge.font.col = "#000000",
  sort.coefs = FALSE,
  height = NULL,
  width = NULL,
  levelSeparation = 100,
  tree.font.size = 22,
  edgethickness.by.ncases = FALSE,
  font.family = "Lato",
  uselog = FALSE,
  tooltip.coefs = TRUE,
  tooltip.delay = 50,
  table.font.size = "16px",
  table.dat.padding = "0px",
  table.lo.col = "#0290EE",
  table.hi.col = "#FE4AA3",
  dragNodes = FALSE,
  zoomView = FALSE,
  nodeSpacing = 150,
  blockShifting = TRUE,
  edgeMinimization = TRUE,
  parentCentralization = TRUE,
  direction = "UD",
  trace = 0
)

Arguments

`x`	`rtMod` object trained using s_LINAD
`main`	Character: Title.
`bg`	Background color.
`shape`	Character: Node shape; one of: "square", "triangle", "box", "circle", "dot", "star", "ellipse", "database", "text", "diamond".
`nodelabels`	Logical: If TRUE, inlcude node labels.
`ncases.inlabels`	Logical: If TRUE, include number of cases with the node labels.
`rules.on.edges`	Logical: If TRUE, display rules on edges instead of nodes.
`top`	Integer: If not NULL, only show the top `top` coefficients.
`root.col`	Color for root node.
`node.col`	Color for nodes.
`leaf.col`	Color for leaf nodes.
`edge.col`	Color for edges.
`edge.width`	Numeric: Width for edges.
`arrow.scale`	Numeric: Scale factor for arrows.
`arrow.middle`	Logical: If TRUE, draw arrows in the middle of edges.
`col.highlight`	Color for surrounding edges when node is selected.
`node.font.col`	Color for node labels. Default varies by `shape`, black or white depending if `visNetwork` draws labels on node or underneath
`edge.font.col`	Color for edge labels.
`sort.coefs`	Logical: If TRUE, sort each coefs table.
`height`	Numeric: Height for `visNetwork`. Default = NULL, i.e. auto
`width`	Numeric: Width for `visNetwork`. Default = NULL, i.e. auto
`levelSeparation`	Numeric: N of pixels to separate tree levels.
`tree.font.size`	Integer: Font size for tree labels. Default = 22
`edgethickness.by.ncases`	Logical: If TRUE, scale edge thickness by number of cases with weight = 1
`font.family`	Character: Font to use throughout. Default = 'Helvetica Neue', because otherwise it may fail on a number of external viewers.
`uselog`	Logical: If TRUE, use log10 scale for coefficient colors.
`tooltip.coefs`	Logical: If TRUE, show html coefficient tables on hover over nodes. This was placed here before a custom html table creation function was made to replace some impossibly slow alternatives.
`tooltip.delay`	Numeric: Delay (in milliseconds) on mouse over before showing tooltip.
`table.font.size`	Character: Font size for html coefficient on-hover tables.
`table.dat.padding`	Ignore, has no visible effect. Otherwise, Character: html table padding.
`table.lo.col`	Color for lowest coefficient values (negative)
`table.hi.col`	Color for highest coefficient values (positive).
`dragNodes`	Logical: If TRUE, allow dragging nodes.
`zoomView`	Logical: If TRUE, allow zooming.
`nodeSpacing`	Numeric: Spacing between nodes.
`blockShifting`	Logical: If TRUE, allow block shifting.
`edgeMinimization`	Logical: If TRUE, minimize edge length.
`parentCentralization`	Logical: If TRUE, centralize parent nodes.
`direction`	Character: Direction of tree. One of: "UD", "DU", "LR", "RL".
`trace`	Integer: If > 0, print info to console (not particularly informative).