mplot3_laterality: Laterality scatter plot

In egenn/rtemis: Machine Learning and Visualization

Laterality scatter plot

Description

Laterality scatter plot

Usage

mplot3_laterality(
  x,
  regionnames,
  main = NULL,
  ylab = "Left to Right",
  summary.fn = "median",
  summary.lty = 1,
  summary.lwd = 2.5,
  summary.col = NULL,
  arrowhead.length = 0.075,
  deltas = TRUE,
  line.col = theme$fg,
  line.alpha = 0.25,
  lty = 1,
  lwd = 0.3,
  ylim = NULL,
  theme = rtTheme,
  labelify = TRUE,
  autolabel = letters,
  mar = NULL,
  oma = rep(0, 4),
  pty = "m",
  palette = rtPalette,
  par.reset = TRUE,
  pdf.width = 6,
  pdf.height = 6,
  filename = NULL,
  ...
)

Arguments

x	data.frame or data.table which includes columns with ROI names ending in "_L" or "_R"
regionnames	Character, vector: Regions to plot. For example, if regionnames contains "Ant_Insula", x must contain columns Ant_Insula_L and Ant_Insula_R
main	Character: Plot title
ylab	Character: y-axis label
summary.fn	Character: Name of function to summarize left and right values. Default = "median"
summary.lty	Integer: line type for summary arrows
summary.lwd	Float: line width for summary arrows
summary.col	Color for summary arrows
arrowhead.length	Float: arrowhead length in inches. Default = .075
deltas	Logical, If TRUE, show summary statistics. Default = TRUE
line.col	Color for individual cases' lines
line.alpha	Float: transparency for individual lines
lty	Integer: Line type for individual lines. Default = 1
lwd	Float: Line width for individual lines. Default = .3
ylim	Float, vector, length 2: y-axis limits
theme	Character: Run themes() for available themes
labelify	Logical: If TRUE, labelify regionnames
autolabel	Character vector to be used to generate autolabels when using rtlayout with autolabel = TRUE.
mar	Float, vector, length 4: Margins; see par("mar")
oma	Float, vector, length 4: Outer margins; see par("oma")
pty	Character: "s" gives a square plot; "m" gives a plot that fills graphics device size. Default = "m" (See par("pty"))
palette	Vector of colors, or Character defining a builtin palette - get options with rtpalette()
par.reset	Logical: If TRUE, reset par setting before exiting.
pdf.width	Float: Width in inches for pdf output (if filename is set).
pdf.height	Float: Height in inches for pdf output.
filename	Character: Path to file to save plot. Default = NULL
...	Additional arguments to be passed to theme function

Author(s)

E.D. Gennatas

egenn/rtemis documentation built on Nov. 22, 2024, 4:12 a.m.