s_H2ORF: Random Forest on H2O (C, R)
In egenn/rtemis: Machine Learning and Visualization

s_H2ORF

R Documentation

Random Forest on H2O (C, R)

Description

Trains a Random Forest model using H2O (http://www.h2o.ai)

Usage

s_H2ORF(
  x,
  y = NULL,
  x.test = NULL,
  y.test = NULL,
  x.valid = NULL,
  y.valid = NULL,
  x.name = NULL,
  y.name = NULL,
  ip = "localhost",
  port = 54321,
  n.trees = 500,
  max.depth = 20,
  n.stopping.rounds = 0,
  mtry = -1,
  nfolds = 0,
  weights = NULL,
  balance.classes = TRUE,
  upsample = FALSE,
  downsample = FALSE,
  resample.seed = NULL,
  na.action = na.fail,
  h2o.shutdown.at.end = TRUE,
  n.cores = rtCores,
  print.plot = FALSE,
  plot.fitted = NULL,
  plot.predicted = NULL,
  plot.theme = rtTheme,
  question = NULL,
  verbose = TRUE,
  trace = 0,
  save.mod = FALSE,
  outdir = NULL,
  ...
)

Arguments

`x`	Training set features
`y`	Training set outcome
`x.test`	Testing set features (Used to evaluate model performance)
`y.test`	Testing set outcome
`x.valid`	Validation set features (Used to build model / tune hyperparameters)
`y.valid`	Validation set outcome
`x.name`	Character: Name for feature set
`y.name`	Character: Name for outcome
`ip`	Character: IP address of H2O server. Default = "localhost"
`port`	Integer: Port to connect to at `ip`
`n.trees`	Integer: Number of trees to grow
`max.depth`	Integer: Maximum tree depth
`n.stopping.rounds`	Integer: Early stopping if simple moving average of this many rounds does not improve. Set to 0 to disable early stopping.
`mtry`	Integer: Number of variables randomly sampled and considered for splitting at each round. If set to -1, defaults to `sqrt(N_features)` for classification and `N_features/3` for regression.
`nfolds`	Integer: Number of folds for K-fold CV used by `h2o.randomForest`. Set to 0 to disable (included for experimentation only, use train_cv for outer resampling)
`weights`	Numeric vector: Weights for cases. For classification, `weights` takes precedence over `ifw`, therefore set `weights = NULL` if using `ifw`. Note: If `weight` are provided, `ifw` is not used. Leave NULL if setting `ifw = TRUE`.
`balance.classes`	Logical: If TRUE, `h2o.randomForest` will over/undersample to balance data. (included for experimentation only)
`upsample`	Logical: If TRUE, upsample cases to balance outcome classes (for Classification only) Note: upsample will randomly sample with replacement if the length of the majority class is more than double the length of the class you are upsampling, thereby introducing randomness
`downsample`	Logical: If TRUE, downsample majority class to match size of minority class
`resample.seed`	Integer: If provided, will be used to set the seed during upsampling. Default = NULL (random seed)
`na.action`	How to handle missing values. See `?na.fail`
`h2o.shutdown.at.end`	Logical: If TRUE, run `h2o.shutdown(prompt = FALSE)` after training is complete.
`n.cores`	Integer: Number of cores to use
`print.plot`	Logical: if TRUE, produce plot using `mplot3` Takes precedence over `plot.fitted` and `plot.predicted`.
`plot.fitted`	Logical: if TRUE, plot True (y) vs Fitted
`plot.predicted`	Logical: if TRUE, plot True (y.test) vs Predicted. Requires `x.test` and `y.test`
`plot.theme`	Character: "zero", "dark", "box", "darkbox"
`question`	Character: the question you are attempting to answer with this model, in plain language.
`verbose`	Logical: If TRUE, print summary to screen.
`trace`	Integer: If higher than 0, will print more information to the console.
`save.mod`	Logical: If TRUE, save all output to an RDS file in `outdir` `save.mod` is TRUE by default if an `outdir` is defined. If set to TRUE, and no `outdir` is defined, outdir defaults to `paste0("./s.", mod.name)`
`outdir`	Path to output directory. If defined, will save Predicted vs. True plot, if available, as well as full model output, if `save.mod` is TRUE
`...`	Additional parameters to pass to `h2o::h2o.randomForest`

Value

rtMod object

Author(s)

E.D. Gennatas

Other Supervised Learning: s_AdaBoost(), s_AddTree(), s_BART(), s_BRUTO(), s_BayesGLM(), s_C50(), s_CART(), s_CTree(), s_EVTree(), s_GAM(), s_GAM.default(), s_GAM.formula(), s_GBM(), s_GLM(), s_GLMNET(), s_GLMTree(), s_GLS(), s_H2ODL(), s_H2OGBM(), s_HAL(), s_KNN(), s_LDA(), s_LM(), s_LMTree(), s_LightCART(), s_LightGBM(), s_MARS(), s_MLRF(), s_NBayes(), s_NLA(), s_NLS(), s_NW(), s_PPR(), s_PolyMARS(), s_QDA(), s_QRNN(), s_RF(), s_RFSRC(), s_Ranger(), s_SDA(), s_SGD(), s_SPLS(), s_SVM(), s_TFN(), s_XGBoost(), s_XRF()

Other Tree-based methods: s_AdaBoost(), s_AddTree(), s_BART(), s_C50(), s_CART(), s_CTree(), s_EVTree(), s_GBM(), s_GLMTree(), s_H2OGBM(), s_LMTree(), s_LightCART(), s_LightGBM(), s_MLRF(), s_RF(), s_RFSRC(), s_Ranger(), s_XGBoost(), s_XRF()