make_parental_chain: Construct parental chain id vector from pedigree trio...
In ekstroem/networkR: Network Analysis and Visualization
Description
Usage
Arguments
Value
Author(s)
Examples
Description
Create a vector of length n, giving the id of
parental chains. If the pedigree is totally connected, then everyone
will end up in tree 1, otherwise the tree numbers represent the
disconnected subfamilies. Singleton subjects each have unique
family numbers.
No check is done to ensure that the id, fid, and mid actually refer to proper family structure.
References to ids in the fid and mid arguments that are not part of the id vector are considered founders.
Usage
1
make_parental_chain(id, fid, mid)
Arguments
id
Numeric vector of ids
fid
Numeric vector of ids of the father. This should be NA or 0 for a founder.
mid
Numeric vector of ids of the mother. This should be NA or 0 for a founder.
Value
Returns an integer vector giving the family index
Author(s)
Claus Ekstrom ekstrom@sund.ku.dk
Examples
1
2
3
4
id <- 1:11
fid <- c(0,0,1,0,0,4,0,0,3,7,7)
mid <- c(0,0,2,0,0,5,0,0,6,6,8)
make_parental_chain(id, fid, mid)
ekstroem/networkR documentation built on July 25, 2020, 8:30 a.m.
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Description Usage Arguments Value Author(s) Examples
Description
Create a vector of length n, giving the id of parental chains. If the pedigree is totally connected, then everyone will end up in tree 1, otherwise the tree numbers represent the disconnected subfamilies. Singleton subjects each have unique family numbers.
No check is done to ensure that the id, fid, and mid actually refer to proper family structure. References to ids in the fid and mid arguments that are not part of the id vector are considered founders.
Usage
1 | make_parental_chain(id, fid, mid)
|
Arguments
id |
Numeric vector of ids |
fid |
Numeric vector of ids of the father. This should be NA or 0 for a founder. |
mid |
Numeric vector of ids of the mother. This should be NA or 0 for a founder. |
Value
Returns an integer vector giving the family index
Author(s)
Claus Ekstrom ekstrom@sund.ku.dk
Examples
1 2 3 4 | id <- 1:11
fid <- c(0,0,1,0,0,4,0,0,3,7,7)
mid <- c(0,0,2,0,0,5,0,0,6,6,8)
make_parental_chain(id, fid, mid)
|
R Package Documentation
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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