generateDistFeat: Generate the distinguishing feature family for a set of trees
In elkebir-group/phydoser: Design a follow-up single-cell sequencing experiment from bulk sequencing data
Description
Usage
Arguments
Value
Examples
View source: R/phydose-mainfunctions.R
Description
For each tree in the input list, generateDistFeat finds the corresponding distinguishing feature family which
is a set of distinguishing features made up of root to mutation paths (featurettes) that unqiuely distinguishes that tree from
all other trees in the input list.
Usage
1
generateDistFeat(treeList)
Arguments
treeList
a list of trees as binary matrices
Value
a list of lists of featurettes.
Examples
1
2
generateDistFeat(phydata$trees)
## Not run: generateDistFeat(AML38$trees)
elkebir-group/phydoser documentation built on July 16, 2020, 4:43 p.m.
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Description Usage Arguments Value Examples
View source: R/phydose-mainfunctions.R
Description
For each tree in the input list, generateDistFeat finds the corresponding distinguishing feature family which is a set of distinguishing features made up of root to mutation paths (featurettes) that unqiuely distinguishes that tree from all other trees in the input list.
Usage
1 | generateDistFeat(treeList)
|
Arguments
treeList |
a list of trees as binary matrices |
Value
a list of lists of featurettes.
Examples
1 2 | generateDistFeat(phydata$trees)
## Not run: generateDistFeat(AML38$trees)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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