plotQTL_base: Set up an empty plot for QTL positions

In ellisztamas/arghqtl: Tools for plotting and downstream analysis of R/QTL objects in R

Description

Creates an empty genome mapping for plotting positions and confidence intervals of QTL inferred using r/qtl

Usage

plotQTL_base(
  plotQTL,
  by = 20,
  maxy = 11,
  miny = 11,
  track_labels = NULL,
  ylab = "Marker distance",
  ...
)

Arguments

plotQTL	A plotQTL object from plotQTL().
by	Intervals between y-axis tick labels. Defaults to 20.
maxy, miny	Upper and lower limits of the y-axis.
track_labels	Vector of labels to adorn the bottom of each track.
ylab	Label for the y axis. Defaults to
...	Additional arguments passed to graphical parameters.

Value

An empty plot to which QTL tracks can be added.

ellisztamas/arghqtl documentation built on March 18, 2021, 9:44 p.m.