qtleffects_points: Points for QTL effect sizes.

Description Usage Arguments

Description

Add points for QTL effect sizes to an existing qtleffects plot. These can be raw effect sizes or percent variance explained (PVE). For the former, confidence intervals are also plotted.

Usage

1
qtleffects_points(qtleffects, qtl_object, model_fit, type = "effect", ...)

Arguments

qtleffects

A qtleffects object from qtleffects() denoting x-value positions.

model_fit

A fitQTL object from r/qtl.

type

Variable to be plotted. This should either be 'effect' to plot raw effect sizes, or 'PVE' to plot percentages of variance explained.

...

further arguments passed to points.

qtlobject

A QTL object from r/qtl.


ellisztamas/qtltools documentation built on May 3, 2019, 10:42 p.m.