README.md

In elmerfer/GenomeDB: it will storage genomes and annotation files

GenomeDB

This library is intended to facilitate the blind installation of Genomes to be used for the Aligners library on other tools

Getting Started

Installation

install.packages("devtools")
library(devtools)
install_github("elmerfer/GenomeDB")

Prior to download and install genomes and annotations, the user should specify where the database structure will be created (file directory into your system).

SetDBdirectory("my/favorite/directory")

This will create a directory named

/my/favorite/directory/GenomeDB

and all the rest of the files and softwares (see Aligners, ArribaR and RMiXCR NGS software familly)

** Instalation see Wiki

Authors Elmer A. Fernández Guadalupe Nibeyro

elmerfer/GenomeDB documentation built on March 1, 2023, 1:11 a.m.