emilygoren/BinQuasi: Analyzing Replicated ChIP Sequencing Data Using Quasi-Likelihood
Identify peaks in ChIP-seq data with biological replicates using a one-sided quasi-likelihood ratio test in quasi-Poisson or quasi-negative binomial models.
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Package details |
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| Author | Emily Goren [aut, cre], Steve Lund [aut] (The author of the QuasiSeq package, from which all functions were modified to produce this package.), Long Qu [aut] (The author of the QuasiSeq package, from which all functions were modified to produce this package.), Ian Marschner [aut] (The author of glm2::glm.fit2, which was modified slightly leading to glm.fit3 in this package.), Daniel Gerhard [aut] (The author of mcprofile::orglm.fit, which was modified slightly and used under the same name in this package.), R Core Team [aut] (The author of stats::glm.fit, which was modified slightly leading to glm.fit3 in this package.) |
| Maintainer | Emily Goren <emily.goren@gmail.com> |
| License | GPL (>= 2) |
| Version | 0.1-6 |
| URL | https://github.com/emilygoren/BinQuasi |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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