Man pages for emilygoren/BinQuasi
Analyzing Replicated ChIP Sequencing Data Using Quasi-Likelihood

BinQuasiAnalyzing Replicated ChIP Sequencing Data Using...
BQCall peaks in replicated ChIP-seq data using BinQuasi
call.peaksCall peaks from a list of window-level p-values
coef.glmExtract model coefficients
count.tableCreate a matrix of ChIP-seq count data
duplicated.matrixDetermine duplicate elements
NBDevFit a negative binomial GLM for a given design matrix
PoisDevCompute Poisson deviances for a given design matrix
QL.fitFit quasi-likelihood models to replicated ChIP-seq data...
QL.resultsObtain p- and q-values using results from 'QL.fit'
unique.matrixRemove duplicate elements
emilygoren/BinQuasi documentation built on Aug. 13, 2018, 2:46 a.m.