dpgmm_init: Run MCMC for DPGMMM model, utilizing pilot chain

Description Usage Arguments

View source: R/dpgmm_init.R

Description

Run MCMC for DPGMMM model, utilizing pilot chain

Usage

1
dpgmm_init(data, design, lambda2, alpha, G, V, K, N, iter, init_iter)

Arguments

data

A column-major $G \cdot VN$ gene expressionvector/matrix

design

A column-major $V \cdot V$ experimental design vector/matrix

lambda2

prior variance for base measure

alpha

DP concentration parameter

G

number of genes

V

number of varieties/groups

K

maximum number of clusters

N

samples per variety/group

iter

number of iterations for main chain

init_iter

number of iterations for pilot chain


emittman/dpOMP documentation built on May 13, 2017, 6:04 p.m.