R/globals.R

# Solve https://github.com/eolagbaju/ODER/runs/2410722950
# https://github.com/LieberInstitute/megadepth/blob/master/R/globals.R
# https://www.r-bloggers.com/2019/08/no-visible-binding-for-global-variable/
utils::globalVariables(c(
    "chrom",
    "queryHits",
    "subjectHits",
    "n_dis_exons",
    "seqnames",
    "start",
    "end",
    "start1",
    "end1",
    "start_diff",
    "end_diff",
    "median",
    "mcc",
    "mrg",
    ".",
    "n_eq_0",
    "maxgap",
    "colours",
    "exon",
    "intergenic",
    "intron",
    "gene_biotype",
    "transcript_biotype",
    "transcript_support_level",
    "type",
    "transcript_id",
    "exon_number",
    "revmap",
    "group_name",
    "strand",
    "elements_collapsed",
    "first.X.group_name",
    "second.X.gene_id",
    "second.X.type",
    "second.internal_cds",
    "gold",
    "first.X.three_prime_utr_id",
    "first.X.five_prime_utr_id",
    "gene_id",
    "Freq",
    "first.X.cds_id",
    "first.X.lncrna_id",
    "first.X.ncrna_id",
    "first.X.pseudoGene_id",
    "Name",
    "tissue_options",
    "gtf_path",
    "pseudogene"
))
eolagbaju/ODER documentation built on Dec. 20, 2021, 5:21 a.m.