NEWS.md

In epiforecasts/EpiNow: Estimate Realtime Case Counts and Time-varying Epidemiological Parameters

EpiNow 0.3.0

• Added documentation.
• Added GitHub Actions for documentation and CRAN check.
• Added function to map from simulated cases by date of infection to cases by date of report.
• Added function examples
• Update README with introduction, quick start guide, and contribution information
• Added a getting started vignette.
• Improve CRAN compliance and cleaned up CRAN check results

EpiNow 0.2.0

• Time-varying window for Rt estimation.
• Refactored all code in data.table.
• Refactored code base.
• Added mapping from onset cases to infection with upscaling to account for additional truncation.
• Added minimal example to all functions
• Added an approximate mapping for reporting delay that has an adaptive case threshold.
• Switched to using a generation time estimate rather than a serial interval (see `data-raw/ganyani-generation-time.rs)

EpiNow 0.1.0

• Added a NEWS.md file to track changes to the package.
• Extract tooling from global nowcasts.
• Parameterised the report to be generalised.
• Added a regional pipeline and made a national summary nowcast optional.
• Added summary and plotting functions built to work from saved results.
• Added a function to summarise results across regions

epiforecasts/EpiNow documentation built on Oct. 26, 2020, 2:38 p.m.