aggregate_top_taxa: aggregate_top_taxa from microbiome package
In erifa1/ExploreMetabar: ExploreMetabar
aggregate_top_taxa R Documentation
aggregate_top_taxa from microbiome package
Description
aggregate_top_taxa from microbiome package
Usage
aggregate_top_taxa(x, top, level)
Arguments
x
phyloseq object
top
Keep the top-n taxa, and merge the rest under the category 'Other'. Instead of top-n numeric this can also be a character vector listing the groups to combine.
level
Summarization level (from ‘rank_names(pseq)’)
erifa1/ExploreMetabar documentation built on Jan. 12, 2023, 1:51 a.m.
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| aggregate_top_taxa | R Documentation |
aggregate_top_taxa from microbiome package
Description
aggregate_top_taxa from microbiome package
Usage
aggregate_top_taxa(x, top, level)
Arguments
x |
phyloseq object |
top |
Keep the top-n taxa, and merge the rest under the category 'Other'. Instead of top-n numeric this can also be a character vector listing the groups to combine. |
level |
Summarization level (from ‘rank_names(pseq)’) |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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