Man pages for eriqande/herring
genetic stock identification of river herring
| alewife_run_settings | function to return parameter settings for... |
| blueback_run_settings | function to return parameter settings for... |
| brewerRamp | create a ramp of colors starting from the last and proceeding... |
| do_mixture_analysis | analyzes a mixture from bycatch data frame to the end |
| gsi_self_assignment | Run gsi_sim for a self-assignment analysis and caputure the... |
| herring_all_analyses | main wrapper for doing all the analyses |
| herring_csv2gpiper | Read in a herring baseline file and make a gPiper data frame... |
| herring_main_baseline_assess_func | main wrapper function that does all the steps for assessing... |
| herring_main_bycatch_analyses | all the bycatch related steps wrapped up in this function |
| herring_mixture_sims | Do the mixture simulations and make some nice ggplots of the... |
| make_baseline_file | make a gsi-sim file from a gpiper data frame |
| read_and_stratify_bycatch | reads the bycatch into a data frame and makes each stratum a... |
| simple_barplot | make a simple barplot of proportions assigned from an... |
| to_pops_barplot | make a barplot that has different densities of the same color... |
| write_gsi_sim_mixfile_from_bycatch_data_frame | writes a gsi_sim mixture file from a data frame |
