Files in esqLABS/esqlabsR
esqLABS utilities package

.Rbuildignore

.github/.gitignore

.github/workflows/main-workflow.yaml

.gitignore

.gitmodules

.lintr

CODE_OF_CONDUCT.md

DESCRIPTION

LICENSE.md

NAMESPACE

NEWS.md R/enum.R R/error-checks.R R/esqlabs-env.R R/esqlabs-plot-export-configuration.R R/example.R R/messages.R R/project-configuration.R R/reexports.R R/scenario-configuration.R R/scenario.R R/sensitivity-calculation.R R/sensitivity-spider-plot.R R/sensitivity-tornado-plot.R R/sensivitity-time-profiles.R R/utilities-data-combined.R R/utilities-data.R R/utilities-figures.R R/utilities-file.R R/utilities-individual.R R/utilities-parallel.R R/utilities-parameters.R R/utilities-population.R R/utilities-project-configuration.R R/utilities-quantity.R R/utilities-scenario-configuration.R R/utilities-scenarios.R R/utilities-sensitivity-calculation.R R/utilities-simulation.R R/utilities.R R/zzz.R README.Rmd README.md

_pkgdown.yml

esqlabsR.Rproj

hextools/circles.png

hextools/esqlabsR-logo.png

hextools/hexsticker.R

inst/WORDLIST

inst/extdata/SpeciesParameters.xlsx

inst/extdata/examples/TestProject/Configurations/Applications.xlsx

inst/extdata/examples/TestProject/Configurations/Individuals.xlsx

inst/extdata/examples/TestProject/Configurations/ModelParameters.xlsx

inst/extdata/examples/TestProject/Configurations/Plots.xlsx

inst/extdata/examples/TestProject/Configurations/Populations.xlsx

inst/extdata/examples/TestProject/Configurations/PopulationsCSV/README.md

inst/extdata/examples/TestProject/Configurations/PopulationsCSV/TestPopulation.csv

inst/extdata/examples/TestProject/Configurations/README.md

inst/extdata/examples/TestProject/Configurations/Scenarios.xlsx

inst/extdata/examples/TestProject/Data/TestProject_TimeValuesData.xlsx

inst/extdata/examples/TestProject/Data/esqlabs_dataImporter_configuration.xml

inst/extdata/examples/TestProject/Models/Simulations/Aciclovir.pkml

inst/extdata/examples/TestProject/Models/Simulations/README.md

inst/extdata/examples/TestProject/ProjectConfiguration.xlsx

inst/extdata/examples/TestProject/Results/Figures/README.md inst/extdata/examples/TestProject/Results/SimulationResults/README.md inst/extdata/update-packages.R man/Distributions.Rd man/ExportConfiguration.Rd man/GenderInt.Rd man/LLOQMode.Rd man/ProjectConfiguration.Rd man/Scenario.Rd man/ScenarioConfiguration.Rd man/ULOQMode.Rd man/applyIndividualParameters.Rd man/calculateMeanDataSet.Rd man/col2hsv.Rd man/compareSimulations.Rd man/compareWithNA.Rd man/createDataCombinedFromExcel.Rd man/createDefaultProjectConfiguration.Rd man/createEsqlabsExportConfiguration.Rd man/createEsqlabsPlotConfiguration.Rd man/createEsqlabsPlotGridConfiguration.Rd man/createPlotsFromExcel.Rd man/createProjectConfiguration.Rd man/createScenarios.Rd man/dot-createConfigurationFromRow.Rd man/dot-readOntongeniesFromXLS.Rd man/dot-validateClassHasField.Rd man/dot-validateDataCombinedFromExcel.Rd man/dot-validateExportConfigurationsFromExcel.Rd man/dot-validateParametersStructure.Rd man/dot-validatePlotConfigurationFromExcel.Rd man/dot-validatePlotGridsFromExcel.Rd man/dot-validateScenarioConfigurations.Rd man/enumPutList.Rd man/esqlabsColors.Rd man/esqlabsRSettingNames.Rd man/exampleDirectory.Rd man/exampleProjectConfigurationPath.Rd man/executeInParallel.Rd man/exportParametersToXLS.Rd man/extendParameterStructure.Rd man/extendPopulationByUserDefinedParams.Rd man/extendPopulationFromXLS.Rd

man/figures/README-unnamed-chunk-6-1.png

man/figures/circles.png

man/figures/logo.png

man/geomean.Rd man/geosd.Rd man/getAllApplicationParameters.Rd man/getEsqlabsRSetting.Rd man/getIndexClosestToValue.Rd man/getMoleculeNameFromQuantity.Rd man/initProject.Rd man/initializeSimulation.Rd man/isParametersEqual.Rd man/isTableFormulasEqual.Rd man/loadObservedData.Rd man/loadObservedDataFromPKML.Rd man/loadScenarioResults.Rd man/pathFromClipboard.Rd man/readExcel.Rd man/readIndividualCharacteristicsFromXLS.Rd man/readParametersFromXLS.Rd man/readPopulationCharacteristicsFromXLS.Rd man/readScenarioConfigurationFromExcel.Rd man/reexports.Rd man/removeFromList.Rd man/runScenarios.Rd man/sampleRandomValue.Rd man/saveScenarioResults.Rd man/sensitivityCalculation.Rd man/sensitivitySpiderPlot.Rd man/sensitivityTimeProfiles.Rd man/sensitivityTornadoPlot.Rd man/setApplications.Rd man/setParameterValuesByPathWithCondition.Rd man/sourceAll.Rd man/stringToNum.Rd man/writeIndividualToXLS.Rd man/writeParameterStructureToXLS.Rd

tests/data/AciclovirLaskinData.xlsx

tests/data/Individuals.xlsx

tests/data/ObsDataAciclovir_1.pkml

tests/data/ObsDataAciclovir_2.pkml

tests/data/ObsDataAciclovir_3.pkml

tests/data/Parameters.xlsx

tests/data/ProjectConfiguration-V5.xlsx

tests/data/ProjectConfigurationEnvironmentVariable.xlsx

tests/data/oneObsSimDC

tests/data/simple.pkml

tests/data/simple2.pkml

tests/testthat.R tests/testthat/_snaps/scenario-configuration.md tests/testthat/_snaps/sensitivity-calculation.md tests/testthat/_snaps/sensitivity-spider-plot.md

tests/testthat/_snaps/sensitivity-spider-plot/filtered-spider.svg

tests/testthat/_snaps/sensitivity-spider-plot/multiple-output-path-spiders.svg

tests/testthat/_snaps/sensitivity-spider-plot/sensitivityspiderplot-custom-pk-parameter.svg

tests/testthat/_snaps/sensitivity-spider-plot/sensitivityspiderplot-works-as-expected-with-absolute-x-values.svg

tests/testthat/_snaps/sensitivity-spider-plot/sensitivityspiderplot-works-as-expected-with-absolute-y-values.svg

tests/testthat/_snaps/sensitivity-spider-plot/sensitivityspiderplot-works-as-expected.svg

tests/testthat/_snaps/sensitivity-spider-plot/sensitivityspiderplot-works-with-user-parameter-path-names.svg

tests/testthat/_snaps/sensitivity-time-profiles.md

tests/testthat/_snaps/sensitivity-time-profiles/filtered-profile.svg

tests/testthat/_snaps/sensitivity-time-profiles/multiple-output-path-profiles-with-2-observed-data-amount.svg

tests/testthat/_snaps/sensitivity-time-profiles/multiple-output-path-profiles-with-2-observed-data-concentration.svg

tests/testthat/_snaps/sensitivity-time-profiles/multiple-output-path-profiles-with-2-observed-data-same-dimension-concentration.svg

tests/testthat/_snaps/sensitivity-time-profiles/multiple-output-path-profiles-with-observed-data.svg

tests/testthat/_snaps/sensitivity-time-profiles/multiple-output-path-profiles.svg

tests/testthat/_snaps/sensitivity-time-profiles/sensitivitytimeprofiles-linear-y-axis.svg

tests/testthat/_snaps/sensitivity-time-profiles/sensitivitytimeprofiles-unit-conversion.svg

tests/testthat/_snaps/sensitivity-time-profiles/sensitivitytimeprofiles-works-as-expected-user-labels.svg

tests/testthat/_snaps/sensitivity-time-profiles/sensitivitytimeprofiles-works-as-expected.svg

tests/testthat/_snaps/sensitivity-time-profiles/sensitivitytimeprofiles-works-with-observed-data.svg

tests/testthat/_snaps/sensitivity-tornado-plot/filtered-tornado.svg

tests/testthat/_snaps/sensitivity-tornado-plot/multiple-output-path-tornado.svg

tests/testthat/_snaps/sensitivity-tornado-plot/sensitivitytornadoplot-custom-pk-parameter.svg

tests/testthat/_snaps/sensitivity-tornado-plot/sensitivitytornadoplot-works-as-expected.svg

tests/testthat/_snaps/sensitivity-tornado-plot/sensitivitytornadoplot-works-with-user-parameter-path-names.svg

tests/testthat/_snaps/utilities-figures/time-profile-esqlabsplotconfiguration.svg

vignettes/Figures/ParametrizationHierarchy.png

vignettes/Figures/ScenarioWorkflow.png

vignettes/Figures/esqlabs-workflow.png

vignettes/Figures/functionVisualizerPopup.jpg

vignettes/Figures/functionVisualizerSnaps.jpg

vignettes/Figures/functionVisualizerStart.jpg

vignettes/Figures/plot-workflow.png

vignettes/Figures/scenarios_links_files.png

vignettes/Figures/unitConverter.jpg

vignettes/Workflow_scheme.pptx

vignettes/esqlabsR-advanced.Rmd vignettes/esqlabsR-design-scenarios.Rmd vignettes/esqlabsR-plot-results.Rmd vignettes/esqlabsR-project-structure.Rmd vignettes/esqlabsR-run-simulations.Rmd vignettes/esqlabsR-sensitivity.Rmd vignettes/esqlabsR-workflow-overview.Rmd vignettes/esqlabsR.Rmd vignettes/presentations.Rmd

vignettes/presentations/_extensions/quarto-ext/fontawesome/_extension.yml

vignettes/presentations/_extensions/quarto-ext/fontawesome/assets/css/all.css

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vignettes/presentations/_extensions/quarto-ext/fontawesome/fontawesome.lua

vignettes/presentations/_introduction-to-esqlabsR.html

vignettes/presentations/_introduction-to-esqlabsR.qmd

vignettes/presentations/_introduction-to-esqlabsR_cache/revealjs/__packages

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vignettes/presentations/introduction-to-esqlabsR-miniature.png

vignettes/project-migration-guide.Rmd

esqLABS/esqlabsR documentation built on April 17, 2025, 10:51 a.m.

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esqLABS/esqlabsR
esqLABS utilities package

Files in esqLABS/esqlabsR
esqLABS utilities package

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esqLABS/esqlabsR esqLABS utilities package

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esqLABS/esqlabsR
esqLABS utilities package

Files in esqLABS/esqlabsR
esqLABS utilities package