Man pages for estfernan/boost
Bayesian Modeling of Spatial Transcriptomics Data
| bc | Human Breast Cancer (BC) Dataset |
| binarize.st | Dichotomise Gene Expression Levels |
| binSpect | Binary Spatial Extraction of Genes |
| boost | boost: Bayesian Modeling of Spatial Transcriptomics Data |
| BOOST.GP | Fit BOOST-GP Model for Gene Expression Levels |
| BOOST.Ising | BOOST-Ising Model for Dichotomised Expression Levels |
| compute.metrics | Performance of Gene Identification |
| get.neighbors | Get Neighborhood Information |
| get.size.factor | Get Size Factor Estimate |
| mob | Mouse Olfactory Bulb (MOB) Dataset |
| normalize.st | Normalize Sequence Count Data |
| print.binSpect | Print BinSpect Results |
| print.BOOST.GP | Print BOOST-GP Model Fitting Results |
| print.BOOST.Ising | Print BOOST-Ising Model Fitting Results |
| print.SPARK | Print SPARK Results |
| print.SpatialDE | Print SpatialDE Results |
| rank.aggregation | Aggregate Rankings |
| SPARK | Spatially Resolved Transcriptomic Analysis |
| SpatialDE | Statistical Test to Identify Genes with Spatial Patterns |
| st.plot | Spatial Transcriptomics Plot |
