README.md

In etaijacob/CMA: An R package for correlated mutation analysis using both codon and amino acid levels

CMA

Correlated Mutation Analysis

An R package for correlated mutation analysis using both codon and amino acid levels

CMA provides several methods for calculating correlated mutations analysis. Methods that are currently provided in this package are: OMES, MI, DCA.

If you use this package please cite:

Etai Jacob, Ron Unger and Amnon Horovitz (2015). Codon-level information improves predictions of inter-residue contacts in proteins by correlated mutation analysis. eLife 2015;10.7554/eLife.08932 http://dx.doi.org/10.7554/eLife.08932.

To install:

devtools::install_github("etaijacob/CMA")

Notes

This pacakge code was checked on Mac OS

etaijacob/CMA documentation built on Dec. 27, 2019, 4:17 p.m.