ksCal: ksCal generates KS statistics for aKO given the base...
In etheleon/metamaps: MetamapsDB: R package for querying Metagenomics data against Metabolic Pathways and Gene Centric Assemblies
Description
Usage
Arguments
Value
Description
runs a "two.sided" KS test and reports the KS and p value
Usage
1
ksCal(contigDF, baseDistribution, cores)
Arguments
contigDF
data.frame with count frequency and rpkm of ALL KOs' contigs for both gDNA and cDNA obtained from query
baseDistribution
the
cores
number of cores to use
Value
data.frame with columns: ko, p.value and KS statistic (D)
etheleon/metamaps documentation built on May 16, 2019, 9:05 a.m.
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Description Usage Arguments Value
Description
runs a "two.sided" KS test and reports the KS and p value
Usage
1 | ksCal(contigDF, baseDistribution, cores)
|
Arguments
contigDF |
data.frame with count frequency and rpkm of ALL KOs' contigs for both gDNA and cDNA obtained from query |
baseDistribution |
the |
cores |
number of cores to use |
Value
data.frame with columns: ko, p.value and KS statistic (D)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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