control_fdr: Filter the data by p-value
In evanamartin/TopPICRDMS: What the Package Does (One Line, Title Case)
Description
Usage
Arguments
Value
Description
The control_fdr() function filters the data by p-value for each
annotation type. If the p-values from the pval_cutoff() function are
used the overall FDR will fall below the given threshold.
Usage
1
control_fdr(x, pvals)
Arguments
x
...
pvals
A vector of three numeric values to be used as p-value cutoffs.
The p-value cutoffs must be in the order of unique(x$AnnType). For example,
if unique(x$AnnType) = "SwissProt", "TrEMBL", "VarSplic" then the p-value
cutoff for SwissProt must be the first element of pvals, the p-value cutoff
for TrEMBL must be the second element of pvals, and the p-value cutoff for
VarSplic must be the third element of pvals.
Value
...
evanamartin/TopPICRDMS documentation built on Dec. 20, 2021, 6:46 a.m.
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Description Usage Arguments Value
Description
The control_fdr() function filters the data by p-value for each
annotation type. If the p-values from the pval_cutoff() function are
used the overall FDR will fall below the given threshold.
Usage
1 | control_fdr(x, pvals)
|
Arguments
x |
... |
pvals |
A vector of three numeric values to be used as p-value cutoffs. The p-value cutoffs must be in the order of unique(x$AnnType). For example, if unique(x$AnnType) = "SwissProt", "TrEMBL", "VarSplic" then the p-value cutoff for SwissProt must be the first element of pvals, the p-value cutoff for TrEMBL must be the second element of pvals, and the p-value cutoff for VarSplic must be the third element of pvals. |
Value
...
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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