tuneScanStatistics: Run a number of combination of settings for geneRxCluster...

View source: R/statistics.R

tuneScanStatisticsR Documentation

Run a number of combination of settings for geneRxCluster scan statistics. Bioinformatics. 2014 Jun 1;30(11):1493-500.

Description

Run a number of combination of settings for geneRxCluster scan statistics. Bioinformatics. 2014 Jun 1;30(11):1493-500.

Usage

tuneScanStatistics(A, B, CPUs = 25, minWindow = 5, maxWindow = 100,
  windowStep = 5, minProb = 0.75, maxProb = 0.95, probStep = 0.025,
  minTarget = 5, maxTarget = 100, targetStep = 5)

Value

Data frame of clusters statistics from each combination of paramteres tested.


everettJK/gt23 documentation built on May 16, 2024, 12:04 p.m.