summarizermerge: Merge a summary.factorlist() table with any number of glm /...

In ewenharrison/summarizer: Summarizer

Description

A function that takes the output from summary.factorlist(..., glm.id=TRUE) and merges with any number of model dataframes, usually produced with a model wrapper followed by fit2df() function (see examples).

Usage

summarizer.merge = function(factorlist, glm.df, ref.symbol = "-")

Arguments

factorlist	Output from summary.factorlist(..., glm.id=TRUE)
glm.df	From model wrappers followed by fit2df()
ref.symbol	Reference symbol for model reference level, typically "-" or "1.0"

Examples

library(tidyverse)
library(summarizer)

data(colon_s)
explanatory = c("age.factor", "sex.factor", "obstruct.factor", "perfor.factor")
explanatory.multi = c("age.factor", "obstruct.factor")
random.effect = "hospital"
dependent = 'mort_5yr'

# Separate tables
colon_s %>%
  summary.factorlist(dependent, explanatory, glm.id=TRUE) -> example.summary

colon_s %>%
  glmuni(dependent, explanatory) %>%
  fit2df(estimate.suffix=" (univariable)") -> example.univariable

colon_s %>%
  glmmulti(dependent, explanatory) %>%
  fit2df(estimate.suffix=" (multivariable)") -> example.multivariable

colon_s %>%
  glmmixed(dependent, explanatory, random.effect) %>%
  fit2df(estimate.suffix=" (multilevel") -> example.multilevel

# Pipe together
example.summary %>%
  summarizer.merge(example.univariable) %>%
  summarizer.merge(example.multivariable) %>%
  summarizer.merge(example.multilevel) %>%
  select(-c(glm.id, index)) -> example.final
example.final

ewenharrison/summarizer documentation built on May 16, 2019, 9:41 a.m.