ewymathe/testALTREinstall: Workflow for Identifying Regulatory Elements from Chromatin Accessibility Assay Data

This workflow takes alignment data and hotspot calls from assays of open chromatin (ATAC-seq, DNase-seq, and FAIRE-seq) and identifies regulatory elements (e.g. enhancers and promoters) that differ across cell and tissue type.

Getting started

Package details

Maintainer
LicenseGPL-2
Version0.99.0
URL https://github.com/Mathelab/ALTRE
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("ewymathe/testALTREinstall")
ewymathe/testALTREinstall documentation built on May 16, 2019, 9:42 a.m.