Man pages for exseivier/miRclump
Searches for microRNA seeds clumps in mRNA sequences and calculates the probability of obsrving this seeds enrichment

anabelGenerates anagrams for every microRNA seed
clump2gffTransforms the output of miRclump to gff format
freqCalculates the frequenciesof observing any microRNA seed
MappingMaps the mRNA sequences whose have high freuencies of...
miRclumpReturns the mRNA sequences with high frequencies of microRNA...
parseMIRLoad the microRNA seeds from the mature microRNA file
revCompReturns the reverse complement DNA sequence.
exseivier/miRclump documentation built on May 16, 2019, 7:10 p.m.