anabel: Generates anagrams for every microRNA seed

Description Usage Arguments See Also Examples

Description

Generates anagrams for every microRNA seed including the 1A seed. Also it respects the 1A rule. This function takes a character vector which contains the microRNAs seeds and for every seed returns the reverse complement of the e seed, and 2:7 ading 1 adenine to the seed (1A rule).

Usage

1
	miRanagrams <- anabel(mirnas)

Arguments

mirnas

'Character' vector which contains the microRNA seeds

See Also

parseMIR revComp

Examples

1
2
	mirnas <- parseMIR("mature.miRNAs.txt")
	miRanagram <- anabel(mirnas)

exseivier/miRclump documentation built on May 16, 2019, 7:10 p.m.