anabel: Generates anagrams for every microRNA seed
In exseivier/miRclump: Searches for microRNA seeds clumps in mRNA sequences and calculates the probability of obsrving this seeds enrichment
Description
Usage
Arguments
See Also
Examples
Description
Generates anagrams for every microRNA seed including the 1A seed. Also it respects the 1A rule.
This function takes a character vector which contains the microRNAs seeds and for every seed returns the reverse complement of the e seed, and 2:7 ading 1 adenine to the seed (1A rule).
Usage
1
miRanagrams <- anabel(mirnas)
Arguments
mirnas
'Character' vector which contains the microRNA seeds
See Also
Examples
1
2
exseivier/miRclump documentation built on May 16, 2019, 7:10 p.m.
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Description Usage Arguments See Also Examples
Description
Generates anagrams for every microRNA seed including the 1A seed. Also it respects the 1A rule. This function takes a character vector which contains the microRNAs seeds and for every seed returns the reverse complement of the e seed, and 2:7 ading 1 adenine to the seed (1A rule).
Usage
1 | miRanagrams <- anabel(mirnas)
|
Arguments
mirnas |
'Character' vector which contains the microRNA seeds |
See Also
Examples
1 2 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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