freq: Calculates the frequenciesof observing any microRNA seed
In exseivier/miRclump: Searches for microRNA seeds clumps in mRNA sequences and calculates the probability of obsrving this seeds enrichment
Description
Usage
Arguments
See Also
Description
Calculates the frequencies of observing any microRNA seed contained in a character vector
Usage
1
Arguments
patterns
MicroRNA seeds character vector
seqs
DNAStringSet object storing the sequences of interest
width
Numeric argument. It is the width of the window for the seed frequency analysis
See Also
exseivier/miRclump documentation built on May 16, 2019, 7:10 p.m.
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Description Usage Arguments See Also
Description
Calculates the frequencies of observing any microRNA seed contained in a character vector
Usage
1 |
Arguments
patterns |
MicroRNA seeds character vector |
seqs |
DNAStringSet object storing the sequences of interest |
width |
Numeric argument. It is the width of the window for the seed frequency analysis |
See Also
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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