fdge_methods: A table of assay_type,dge_method combination parameters
In facileverse/FacileAnalysis: Modularized and interactive analyses over a FacileDataStore
fdge_methods R Documentation
A table of assay_type,dge_method combination parameters
Description
This table is used to match the assay_type,dge_method combination with
the appropriate bioc container class bioc_class, and default edgeR/limma
model fitting params.
Usage
fdge_methods(assay_type = NULL, on_missing = c("error", "warning"))
Arguments
assay_type
An optional string specifying the valid dge methods for
a given assay type.
Value
A tibble of assay_type -> method and parameter associtiations. If
assay_typeis not NULL, this will be filtered to the associations
valid only for that assay_type. If none are found, this will be a
0-row tibble.
facileverse/FacileAnalysis documentation built on March 15, 2024, 6:44 p.m.
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| fdge_methods | R Documentation |
A table of assay_type,dge_method combination parameters
Description
This table is used to match the assay_type,dge_method combination with
the appropriate bioc container class bioc_class, and default edgeR/limma
model fitting params.
Usage
fdge_methods(assay_type = NULL, on_missing = c("error", "warning"))
Arguments
assay_type |
An optional string specifying the valid dge methods for a given assay type. |
Value
A tibble of assay_type -> method and parameter associtiations. If
assay_typeis not NULL, this will be filtered to the associations
valid only for that assay_type. If none are found, this will be a
0-row tibble.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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