fairmiracle/AMOUNTAIN: Active modules for multilayer weighted gene co-expression networks: a continuous optimization approach

A pure data-driven gene network, weighted gene co-expression network (WGCN) could be constructed only from expression profile. Different layers in such networks may represent different time points, multiple conditions or various species. AMOUNTAIN aims to search active modules in multi-layer WGCN using a continuous optimization approach.

Getting started

Package details

AuthorDong Li, Shan He, Zhisong Pan and Guyu Hu
Bioconductor views DifferentialExpression GeneExpression Microarray Network
MaintainerDong Li <dxl466@cs.bham.ac.uk>
LicenseGPL (>= 2)
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
fairmiracle/AMOUNTAIN documentation built on May 16, 2019, 9:59 a.m.