getDataset: Extract real dataset parameters. Extract Negative Binomial...
In fayezor/myRpackage:
Description
Usage
Arguments
Value
Description
Extract real dataset parameters.
Extract Negative Binomial parameters from real dataset.
Usage
1
getDataset(counts, drop.extreme.dispersion, drop.low.lambda)
Arguments
counts
Numeric matrix of read counts from which to extract parameters.
drop.extreme.dispersion
Proportion of extreme dispersions to drop.
drop.low.lambda
Logical, whether to drop low lambdas.
Value
List of parameters sampled from the real dataset: vector of gene-wise average log-CPM, vector of gene-wise dispersions, library sizes, number of genes.
fayezor/myRpackage documentation built on May 16, 2019, 11:01 a.m.
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Description Usage Arguments Value
Description
Extract real dataset parameters. Extract Negative Binomial parameters from real dataset.
Usage
1 | getDataset(counts, drop.extreme.dispersion, drop.low.lambda)
|
Arguments
counts |
Numeric matrix of read counts from which to extract parameters. |
drop.extreme.dispersion |
Proportion of extreme dispersions to drop. |
drop.low.lambda |
Logical, whether to drop low lambdas. |
Value
List of parameters sampled from the real dataset: vector of gene-wise average log-CPM, vector of gene-wise dispersions, library sizes, number of genes.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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