label_ref_snp: Label one allele (A/C/T/G) as reference and the other as...

In fboehm/countalleles: Converts A/C/T/G SNP genotypes to allele count genotypes (0,1,2)

Description

Label one allele (A/C/T/G) as reference and the other as other for use in determining numeric count genotypes.

Usage

label_ref_snp(gv_actg)

Arguments

gv_actg

A genotype vector (coded as A/C/T/G) for a single SNP locus.

Value

a character vector of length 2 with names reference and other

Examples

label_ref_snp(c("TT", "CT", "CC", "TC"))

fboehm/countalleles documentation built on May 16, 2019, 11:09 a.m.